CDS

Accession Number TCMCG066C08240
gbkey CDS
Protein Id XP_034581288.1
Location join(40551997..40552161,40552669..40552952,40553403..40553819,40554064..40555200,40555275..40555404,40555704..40555939,40556018..40556153,40556242..40556318,40557231..40557337,40557456..40557556)
Gene LOC117844659
GeneID 117844659
Organism Setaria viridis

Protein

Length 929aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034725397.1
Definition tRNA wybutosine-synthesizing protein 2/3/4 isoform X2 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category J
Description Methyltransferase TYW3
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K07055        [VIEW IN KEGG]
ko:K15450        [VIEW IN KEGG]
EC 2.1.1.282        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
2.5.1.114        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0031590        [VIEW IN EMBL-EBI]
GO:0031591        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901657        [VIEW IN EMBL-EBI]
GO:1901659        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGGCAATAAGATGCTCGATTCGTATGGAAGTACCATTGGGGCAGATTGATGAACTTGTTGTTTCTCCGGAGTACGTCCGTTACCTTGTCAGAATTGCCAACTGTAAAATGGAGGCAAACAAAAAACGAATGGATGGATTTCTAGATCTTTTGCAGACTGAGGGTTTGTCAGGTTCGCCAGGGTTGTTAAATAATTGTAACGGAAGTAACAGTCAGACTGTTGATCACAGGGCTTCCCTGGGTTGTGAAGTTAAGATATCATTGGATAAAGGTGCCAAGAAAAATAATGACTTAGTTACAAAAAGGAGAAATGGTGGTAAAAACTGTGATGCTGATGACAGAGGTGATAGTGAAATCGGGGAAGGTTCACTAGAAGCACAGTATTTTGAAAATCAAGACCCTACATGGAGCAAGGGCGCCGAGCATGGTTTTGGTAATGCTAAACGATTAGTGCTGGAGGAGAAGTTGCCCGGAAACAAAAATTATCATCTATCTACTGCTGCATTGAAGATTAGTGGAGAATCAATCGAGAAGCTCTTTTTATGGGGCCAATCATCTTGTGTGTTTCCTGTTGGAGGAGAGCAACGGGTCCTAACTTTTGGTGGTTTTGGAGGACCAGGAAGGCATTCAAGGAGAAACTATTCCCTTCTGCTTGATCACAAATCTGGTTTGTTGACAGAGATGATCTTTAAAGAGTCTCCTTCACCACGGATGGGCCATACAGTTACTTCTGTTGATAATAGCACCTTTGTTATTGGAGGTAGGGGTGGTCCTTCAGAAATTCTTGATGATGTCTGGGTCTTACAAAGCACTGAGAATACCTGGTTAAGACTGGAGTGCAGTGGAAATATCTTCCGCCCAAGGCACCGGCATGCTGCAGCTGCAGTAGCTTCAAAAATATATGTCTTTGGTGGACTTAGTAATGAAGGCTTATATTCCTGCATGAATATACTTGACACGAAAAGTATGGAATGGAGCATAGTTGCTGCTGCTGGCGAATGGCCGTGTGCTCGACACTCACATTCTCTGGTGTCTTATGGTTCAAAGTTATTCATGTTTGGAGGTCATGATGGTCAACATGCACTGAAGGACTTCTACAGTTTTGATACAACAACACTTAAGTGGAACAAGGAAAGCACATATGGGGGAACTCCATCATCTAGGTTTTCACATTGCATGTTCATCTACAAAAATTATCTTGGGATACTTGGGGGTTGCCCTATTACAGGAAACAATCAAGAAGTTGCATTGCTAAACTTAAAGCATGGAGTCTGGTTGTCTGTTTCCATTCCCTTGTTGAGCCAGTGCCTCTGTGTCCGTAGTTCATCGATTGTCATTGAAGATCATCTTGTTATTTTAGGTGGTGGTGCATCTTGCTATGCATTTGGGACCAAATTTAATCAACCAATAATAGTTGATCTGCATTCAGTGGACTCTATGTTTAAACATGATGACAAGAAGGATGGCACGCCTGTACAAAGTTGTGATGCAATCCCTACTGTTGACTTATCAAGAGATGAAAAAAAGGGTCATGATAAGTCACAAAATGATTCTCGTTCTGGTGGTTTTACTGATTCAGGCCCTCTGGTTCTTCAACTGGAAAAGAAGTATGCTAAATTAGCAAAGGACATTCTGAAAAAGTTTGGATGGTTGGATCTTGCTAGAAAAGTTCGAGTGAGCCATGATAACAGCCATGTTCTTTTTCCTGTCAATGAAGTCTTCCATGTCCTAAATACTGATGACCACATGATGATGGAACATAAGTCATGTAACCTTGATGAAACGTTAGCATTTACTGAAAAGAAGCTTGCGGGAGATAACGTATCTCTTCAAAATGCATTAAAAATTTTGTCATCTTGCAATTGTTCCGTTTTGAAAGATGAACTAGCCATCAGCCGAAAGCCTTCCAAGTCTCCTCAAAACATCATGAAGGAACTTGTATCTTCTCTTCTGGAAACTAAAGGAATGCCCTCTCAGTTGTTGGAGCAGCTCCCAGCAAGGTGGGAGACACTTGGTGACATCATCATACTCCCGAAGACATGTTTTAAGGATCCATTGTGGGAATTGGTTAGCGAGGAACTCTGGCCACTAGTTGCCAAGTCACTCGGCGCGCAACGTCTTGCACGTCAAGGTAAAATCATGCCAAATGGTACAAGAGATAGTACACTGGAACTTCTTCTGGGTGATAACGGATGGGTTACCCATCATGAAAATGGCATCTGTTATTCACTTGATGCAACAAAATGTATGTTTTCTTCTGGTAACCGTTCGGAGAAGCTTCGCATGGGACAGCTTGACTGTAGAGATGAGGTGGTTGTGGATTTGTTTGCCGGAATCGGATACTTTGTTCTCCCATTTCTTGTGAAGGCTAATGCTAAGTTCGTTTATGCATGTGAATGGAATCCACATGCTCTGGAGGCTCTTCGACGCAATGTTTGTGACAACCATGTACAAGAACGATGTATTATACTCGAAGGAGATAACCGTGTGACTGCACCCAAAGGTGTTGCTGATCGAGTTTGTCTCGGATTGTTACCCTCAAGTGAATGTAGCTGGGCCACTGCTGTTAGAGCTTTAAGGGTTGAAGGAGGCATATTGCATATACATGGGAATGTCAATGACTCGGATGAGACACGGTGGCTGGACAATGTTGTTGAATCCATCAGTAACATTGCCAAAGCTCACGGACTATCTTGGAGTGTCTCTTTGGAGCATGTCGAACGTGTCAAATGGTATGGGCCACATATTCGACACCTTGTGGTTGACGTAAGATGCCGGCCAATCTAA
Protein:  
MVAIRCSIRMEVPLGQIDELVVSPEYVRYLVRIANCKMEANKKRMDGFLDLLQTEGLSGSPGLLNNCNGSNSQTVDHRASLGCEVKISLDKGAKKNNDLVTKRRNGGKNCDADDRGDSEIGEGSLEAQYFENQDPTWSKGAEHGFGNAKRLVLEEKLPGNKNYHLSTAALKISGESIEKLFLWGQSSCVFPVGGEQRVLTFGGFGGPGRHSRRNYSLLLDHKSGLLTEMIFKESPSPRMGHTVTSVDNSTFVIGGRGGPSEILDDVWVLQSTENTWLRLECSGNIFRPRHRHAAAAVASKIYVFGGLSNEGLYSCMNILDTKSMEWSIVAAAGEWPCARHSHSLVSYGSKLFMFGGHDGQHALKDFYSFDTTTLKWNKESTYGGTPSSRFSHCMFIYKNYLGILGGCPITGNNQEVALLNLKHGVWLSVSIPLLSQCLCVRSSSIVIEDHLVILGGGASCYAFGTKFNQPIIVDLHSVDSMFKHDDKKDGTPVQSCDAIPTVDLSRDEKKGHDKSQNDSRSGGFTDSGPLVLQLEKKYAKLAKDILKKFGWLDLARKVRVSHDNSHVLFPVNEVFHVLNTDDHMMMEHKSCNLDETLAFTEKKLAGDNVSLQNALKILSSCNCSVLKDELAISRKPSKSPQNIMKELVSSLLETKGMPSQLLEQLPARWETLGDIIILPKTCFKDPLWELVSEELWPLVAKSLGAQRLARQGKIMPNGTRDSTLELLLGDNGWVTHHENGICYSLDATKCMFSSGNRSEKLRMGQLDCRDEVVVDLFAGIGYFVLPFLVKANAKFVYACEWNPHALEALRRNVCDNHVQERCIILEGDNRVTAPKGVADRVCLGLLPSSECSWATAVRALRVEGGILHIHGNVNDSDETRWLDNVVESISNIAKAHGLSWSVSLEHVERVKWYGPHIRHLVVDVRCRPI